Faculty Information, Institute for Chemical Research, Kyoto University   [ English | Japanese ]


HANCOCK, Timothy Peter

Bioinformatics Center - Bio-knowledge Engineering -
(Laboratory in the Statistics, Mathematics and Computer Science)
Assistant Professor
Statistics, Mathematics and Computer Science
URL:http://www.bic.kyoto-u.ac.jp/pathway/timhancock/index.html
E-mail: timhancock@kuicr.kyoto-u.ac.jp
Tel: +81-774-38-3038
Fax:

Academic career
    1. 2001, Bachelor of Science, Class I Hons., Statistics, Mathematics and Computer Science, James Cook University, Townsville, Australia
    2. 2007, Doctor of Philosophy, James Cook University, Townsville, Australia
Research field
    Statistics, Mathematics and Computer Science applied to systems biology and bioinformatics
Current research
  1. Systems biology and Bioinformatics
Selected publications
  1. Hancock T, Mamitsuka H, Boosted Network Classifiers for Local Feature Selection IEEE Transactions in Neural Networks 23(11), 1793-1804 (2012)
  2. D. Coomans, C. Smyth, I. Lee, Hancock T., Unsupervised Data Mining: Introduction Comprehensive Chemometrics: Chemical and Biochemical Data Analysis (2009)
  3. Hancock, T., Smyth, C. , Tree-Based Clustering and Extensions Comprehensive Chemometrics: Chemical and Biochemical Data Analysis (Tree-Based Clustering and Extensions)
  4. Hancock, T., Coomans, D., and Everingham, Y, Supervised hierarchical clustering using CART Hancock, T., Coomans, D., and Everingham, Y (2003)
  5. Using Grid computing to achieve timely data mining, Sim, N., Coomans, D., Atkinson, I., Hancock, T. Sim, N., Coomans, D., Atkinson, I., Hancock, T. (2004)
  6. Multivariate regression trees for cluster analysis, Multivariate regression trees for cluster analysis International Symposium on Business and Industrial Statistics (ISBIS) (2004)
  7. Hancock, T., Coomans, D., and Everingham, Y, A Combination of Genetic Algorithms and Boosted Regression Trees for the Prediction RNase L Levels in Subsets of Chronic Fatigue Proceedings of the International Biometrics Conference (IBC) (2004)
  8. Hancock, T., Mamitsuka H., Semi-Supervised Graph Partitioning with Decision Trees International Workshop on Bioinformatics and Systems Biology (IBSB) (2008)
  9. Hancock, T., Mamitsuka H., Active Pathway Identification and Classification with Probabilistic Ensembles International Workshop on Bioinformatics and Systems Biology (IBSB) (2009)
  10. Hancock, T., Mamitsuka H., A Markov classification model for metabolic pathways Workshop on Algorithms in Bioinformatics (WABI) (2009)
  11. Hancock, T., Mamitsuka H., Boosted Optimization for Network Classification Proceedings of the Thirteenth International Conference on Artificial Intelligence and Statistics (AISTATS 2010) (JMLR: Workshop and Conference Proceedings) 9, (2010)
  12. Christine Smyth, Danny Coomans, Yvette Everingham, Timothy Hancock, Auto-associative Multivariate Regression Trees for Cluster Analysis Chemometrics and Intelligent Laboratory Systems 80, 120-129 (2006)
  13. David Donald, Tim Hancock, Danny Coomans, Yvette Everingham, Bagged super wavelets reduction for boosted prostate cancer classification of seldi-tof mass spectral serum profiles Chemolab 82, 2-7 (2006)
  14. Tim Hancock, Raf Put, Danny Coomans, Yvan Vander Heyden, Yvette Everingham, A performance comparison of modern statistical techniques for molecular descriptor selection and retention prediction in chromatographic QSRR studies Chemolab 76, 185-196 (2005)
  15. David Donald, Danny Coomans, Yvette Everingham, Daniel Cozzolino, Mark Gishen, Tim Hancock, Adaptive wavelet modeling of a nested 3 factor experimental design in NIR chemometrics Chemolab 82, 122-129 (2006)
  16. Hancock T, Mamitsuka H., Semi-supervised graph partitioning with decision trees. Genome Inform 20, 102-11 (2008)  [pubmed]
  17. Hancock T, Mamitsuka H., Active pathway identification and classification with probabilistic ensembles. Genome Inform 22, 30-40 (2010)  [pubmed]
  18. Hancock T, Mamitsuka H., A markov classification model for metabolic pathways. Algorithms Mol Biol 5, 10 (2010)  [pubmed]
  19. Hancock T, Takigawa I, Mamitsuka H., Mining metabolic pathways through gene expression. Bioinformatics 26, 2128-35 (2010)  [pubmed]
  20. Hancock T, Wicker N, Takigawa I, Mamitsuka H., Identifying neighborhoods of coordinated gene expression and metabolite profiles. PLoS One 7, e31345 (2012)  [pubmed]


Update: Nov 16,2012